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夜雨聆风 > > 办公文件 > 让 Openclaw (小龙虾)来分析单细胞数据,数据来源最新的Nature主刊文章

让 Openclaw (小龙虾)来分析单细胞数据,数据来源最新的Nature主刊文章

当前时间： 2026-04-03 13:04:37 分类：办公文件 评论(0)
让 Openclaw (小龙虾)来分析单细胞数据,数据来源最新的Nature主刊文章

CNS | 参考文献

文章数据下载
打开 GSE310446
选择要下载的数据
文件夹展示如下
关注公众号，下次完整用龙虾复现nature的空转数据分析
1.先告诉龙虾数据，确认数据是否存在
指令如下
你好 我在电脑的E盘 peixun的文件夹 下面有个loongxia的文件夹， 文件夹中有个sc文件夹， 文件夹中有GSE310446_RAW的文件夹，这个文件夹中的数据是nature文章中下载的单细胞数据，你可以看到吗
想系统学习龙虾可以看OpenClaw：给科研人配一个真正能干活的AI智能体
小龙虾正确的识别到了单细胞数据的路径（我不小心longxia文件夹多写了一个o ，竟然也可以识别）
2.让龙虾读取数据和分析数据
请你直接开始分析，首先帮我读取单细胞的数据，然后对单细胞的数据进行指控，指控的参数就按照常规的默认参数就可以，接下来对数据进行降维聚类，最后进行umap的展示，展示的图要保存为tif
想系统学习龙虾可以看OpenClaw：给科研人配一个真正能干活的AI智能体
我们去查看一下 umap有没有做好
聚类后的umap图结果展示
关注公众号，下次完整用龙虾复现nature的空转数据分析
3.注释单细胞数据
需要进行注释
想系统学习龙虾可以看OpenClaw：给科研人配一个真正能干活的AI智能体
查看文件夹结果
注释的结果展示
关注公众号，下次完整用龙虾复现nature的空转数据分析
4.marker基因的气泡图展示
 帮我展示top3的marker基因，并且用气泡图进行展示，气泡图的颜色要求是红色
让龙虾给我pdf的图片结果
输出了好多文件，包括代码和rdata的数据
marker基因的气泡图展示结果
关注公众号，下次完整用龙虾复现nature的空转数据分析
气泡图的颜色太浅了，帮我改为深红色
改完颜色的marker基因展示如下
关注公众号，下次完整用龙虾复现nature的空转数据分析
想系统学习龙虾可以看OpenClaw：给科研人配一个真正能干活的AI智能体
欢迎加入CNS生信交流群一起讨论与研究时下热门CNS文章各类生信分析方法（若二维码过期可以添加微信：huagesx）
孟德尔＋单细胞全文复现
孟德尔+单细胞全文复现（纯生信公共数据挖掘）

零基础想学生信，看👇这个文章：

零基础也能学的AI生信课（AI助力生信入门班即将开始）

想学机器学习，看👇这个文章：

AI助力多组学与机器学习联合分析（机器学习分析代谢组、蛋白组、宏基因组、网络药理学、转录组）

想系统学单细胞，看👇这个文章：

CNS文章单细胞数据分析内容汇总（基础--进阶--python分析）

想系统学空间转录组，看👇这个文章：

Nature单细胞空间组学1:1复现训练营
跟着CNS文章学空间转录组分析线上直播课（Visium HD、Xenium、Stereo-seq）

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  1. CONNECT:[ UseTime:0.001219s ] mysql:host=127.0.0.1;port=3306;dbname=wenku;charset=utf8mb4
  2. SHOW FULL COLUMNS FROM `fenlei` [ RunTime:0.001518s ]
  3. SELECT * FROM `fenlei` WHERE `fid` = 0 [ RunTime:0.000810s ]
  4. SELECT * FROM `fenlei` WHERE `fid` = 63 [ RunTime:0.000744s ]
  5. SHOW FULL COLUMNS FROM `set` [ RunTime:0.001382s ]
  6. SELECT * FROM `set` [ RunTime:0.000701s ]
  7. SHOW FULL COLUMNS FROM `article` [ RunTime:0.001434s ]
  8. SELECT * FROM `article` WHERE `id` = 491861 LIMIT 1 [ RunTime:0.001105s ]
  9. UPDATE `article` SET `lasttime` = 1775240343 WHERE `id` = 491861 [ RunTime:0.015289s ]
  10. SELECT * FROM `fenlei` WHERE `id` = 64 LIMIT 1 [ RunTime:0.000700s ]
  11. SELECT * FROM `article` WHERE `id` < 491861 ORDER BY `id` DESC LIMIT 1 [ RunTime:0.001143s ]
  12. SELECT * FROM `article` WHERE `id` > 491861 ORDER BY `id` ASC LIMIT 1 [ RunTime:0.001204s ]
  13. SELECT * FROM `article` WHERE `id` < 491861 ORDER BY `id` DESC LIMIT 10 [ RunTime:0.002172s ]
  14. SELECT * FROM `article` WHERE `id` < 491861 ORDER BY `id` DESC LIMIT 10,10 [ RunTime:0.001795s ]
  15. SELECT * FROM `article` WHERE `id` < 491861 ORDER BY `id` DESC LIMIT 20,10 [ RunTime:0.014330s ]
0.248376s